There isn't a proper way to do what you're after.
The proper way to eliminate the rear heater(s) is to either plug or loop it at the driver's front floor heater, leaving the defrost and floor heater up front still intact. For a road going vehicle you still need heat/defrost to be functional, and if you eliminate all the heaters in the bus it will no longer be so.
What you exactly do depends on the body manufacturer. Some ran the heaters in a parallel fashion, others in series. Series will need a loop, parallel won't.
Removing the pipes and gate valves on the engine and replacing with plugs is eliminating the cabin heat system all together, which isn't recommended by most.
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