I had a nice long update that the forum ate.. im really hating the ads in this forum.. id gladly pay to use it if I could get rid of the ads that trigger a browser reload and delete my updates.
booyah touched on it the 9 pin has both J1708 and J1939 pins wired out. its a data Bus meaning you can connect multiple devices in parallel along it including scan tools..
starting in mid-late modek year 00 IH started equipping all vehicles with a 9 pin anticipating transmissions and ABS controllers that would communicate on J1939.
you can buy a pin tool and also a 9 pin connector and move your pins from the 6 pin over to a new 9 pin and then wire in the pins from the J1939 data bus into that 9 pin connector. allison DOC and servicemaxx both can plug into the 9 pin.
so you can effectively create a Y connection of the 2 or 3 wires from the CAN data going from the trans to engine and Y those off to the new diagnostic port
this is a step I skipped on mine because im 4th gen with 2 CAN ports thus I have a separate place to talk to my trans.. 3rd gen doesnt do that.