Yes, you can place an inverter/charger in parallel with a charge controller. If they are simple fixed-voltage devices, just calibrate them to the same cut-off, or plan one to stop just before the other. If you use "smart" multi-charge rate devices, you will have to control the interaction between them. For example, If the shoreline/genny is filling up a low battery, and the sun comes out, the charging voltage from the PV might be misundestood by the AC charger as a battery that is nearly full. The best way to control interaction is to get two units that talk to each other.
My wife and I are looking at possible going off-grid in our planned retirement home. (Any skoolie will have to wait till that's done

It's trailer camping for now.

). I also inherited two off-grid communications sites using older PV technology. I have been doing a LOT of reading, including here.
A good, well written place to start is "The 12-volt Side of Life"
http://bart.ccis.com/home/mnemeth/12volt/12volt.htm by Mark Nemeth, an RV full-timer. Another reference is in the electrical info found in "Poop Sheets by phred"
http://www.phrannie.org/phredex.html. The "Poop Sheets" deal with various aspects of living in homes on wheels.
One line of inverter/chargers and charge controllers is Outback.
http://www.outbackpower.com/ These are the ones I hope to use. Many people think these are the Cadillac of inverters. With their components, you can install a HUB communications box and MATE remote display/controller, and the units will share battery charge and temperature information and act as one. Download the manuals and take a look. The appendix in the MX-60 charge converter manual has very good information on battery charging.
There are lots of other brands out there, too. Most of the off-grid homes my wife and I have toured
http://www.nesea.org/buildings/openhouse/listings.php have used the Trace/Xantrex line, which I understand are the sucessors to the Heart line used in many RVs. (If you see a home listing near you in VT, drop them an email. The official tours are Columbus Day weekend, but many or most are proud to show off their homes by invitation as well.)
Take a look at Home Power magazine
http://www.homepower.com/home/, Download the sample issue in .pdf, and check out the advertisers' web sites.
John, are you a hiker? One of the off-grid comm sites is 2.5 miles up a hiking trail about 40 miles west of you, north of Whitehall. I'll be up there several times this summer supervising contractors, and can show you briefly how the solar, wind and AC genny work together as chargers in old technology. (You would have to enjoy the walk and the view of Lake George, or it would be a lot of work for a little bit of information.)